Acidimicrobiia
| Acidimicrobiia | |
|---|---|
 | |
| Acidimicrobium ferrooxidans | |
Scientific classification  | |
| Domain: | Bacteria |
| Phylum: | Actinomycetota Norris 2013[2] |
| Class: | Acidimicrobiia Stackebrandt et al. 1997[1] |
| Type genus | |
| Acidimicrobium Clark and Norris 1996 | |
| Families[3] | |
| Synonyms | |
| |
The Acidimicrobiia are a class of Actinomycetota, in which three families, eight genera, and nine species have been described, Acidimicrobium ferrooxidans is the type species of the order.[1]
Phylogeny
[edit]The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[3] and National Center for Biotechnology Information (NCBI).[4]
| MLST based phylogeny of 30 proteins.[5] | 16S rRNA based LTP_08_2023[6][7][8] | ||||||||||||||||||||||||||||||||||||
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| 120 marker proteins based GTDB 08-RS214[9][10][11] | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Genera incertae sedis
[edit]- "Spongiisociales" Nguyen 2022
- "Spongiisociaceae" Nguyen 2022
- "Candidatus Spongiisocius" Nguyen 2022
- "Spongiisociaceae" Nguyen 2022
- Acidimicrobiales
- Acidithiomicrobium Davis-Belmar & Norris 2009
- "Microtrichaceae"
- "Candidatus Limnosphaera" Kim, Kang & Cho 2017
See also
[edit]References
[edit]- ^ a b Stackebrandt, E.; Rainey, F. A.; Ward-Rainey, N. L. (1997-04-01). "Proposal for a New Hierarchic Classification System, Actinobacteria classis nov". International Journal of Systematic Bacteriology. 47 (2): 479–491. doi:10.1099/00207713-47-2-479. ISSN 0020-7713.
- ^ Norris PR (2012). "Class II. Acidimicrobiia class. nov.". In Goodfellow M, Kämpfer P, Trujillo ME, Ludwig W, Whitman WB (eds.). Bergey's Manual of Systematic Bacteriology. Vol. 5 (The Actinobacteria), part B (2nd ed.). New York: Springer. p. 1968.
- ^ a b Euzéby JP, Parte AC. "Acidimicrobiia". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved June 22, 2021.
- ^ Sayers; et al. "Acidimicrobiia". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2021-03-20.
- ^ Hu D, Cha G, Gao B. (2018). "A phylogenomic and molecular markers-based analysis of the class Acidimicrobiia". Frontiers in Microbiology. 9: 987. doi:10.3389/fmicb.2018.00987. PMC 5962788. PMID 29867887.
- ^ "The LTP". Retrieved 20 November 2023.
- ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
- ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
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