Lentisphaerota
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| Lentisphaerota | |
|---|---|
Scientific classification  | |
| Domain: | Bacteria |
| Superphylum: | PVC superphylum |
| Phylum: | Lentisphaerota Cho et al. 2021[1] |
| Classes | |
| Synonyms | |
| |
Lentisphaerota is a phylum of bacteria closely related to Chlamydiota and Verrucomicrobiota.[2][3]
It includes two monotypic orders Lentisphaerales and Victivallales. Phylum members can be aerobic or anaerobic and fall under two distinct phenotypes. These phenotypes live within bodies of sea water and were particularly hard to isolate in a pure culture.[4] One phenotype, L. marina, consists of terrestrial gut microbiota from mammals and birds. It was found in the Sea of Japan.[4] The other phenotype (L. araneosa) includes marine microorganisms: sequences from fish and coral microbiomes and marine sediment.
Phylogeny
[edit]The phylogeny based on the work of the All-Species Living Tree Project.[5]
Taxonomy
[edit]The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LSPN)[6] and the National Center for Biotechnology Information (NCBI).[7]
- Phylum Lentisphaerota Cho et al. 2021
- Class Oligosphaeria Qiu et al. 2013
- Order Oligosphaerales Qiu et al. 2013
- Family Oligosphaeraceae Qiu et al. 2013
- Genus Oligosphaera Qiu et al. 2013
- Species Oligosphaera ethanolica Qiu et al. 2013
- Genus Oligosphaera Qiu et al. 2013
- Family Oligosphaeraceae Qiu et al. 2013
- Order Oligosphaerales Qiu et al. 2013
- Class Lentisphaeria Cho et al. 2012
- Order Victivallales Cho et al. 2004
- Family Victivallaceae Derrien et al. 2012
- Genus Victivallis Zoetendal et al. 2003
- Species Victivallis vadensis Zoetendal et al. 2003
- Genus Victivallis Zoetendal et al. 2003
- Family Victivallaceae Derrien et al. 2012
- Order Lentisphaerales Cho et al. 2004
- Family Lentisphaeraceae Cho & Hedlund 2012
- Genus Lentisphaera Cho et al. 2004 emend. Choi et al. 2013
- Species L. araneosa Cho et al. 2004
- Species L. marina Choi et al. 2013
- Species "L. profunda" ♠
- Genus Lentisphaera Cho et al. 2004 emend. Choi et al. 2013
- Family Lentisphaeraceae Cho & Hedlund 2012
- Order Victivallales Cho et al. 2004
- Class Oligosphaeria Qiu et al. 2013
Notes:
♠ Strain found at the National Center for Biotechnology Information (NCBI) but not listed in the List of Prokaryotic names with Standing in Nomenclature (LPSN)
See also
[edit]References
[edit]- ^ Oren A, Garrity GM (2021). "Valid publication of the names of forty-two phyla of prokaryotes". Int J Syst Evol Microbiol. 71 (10): 5056. doi:10.1099/ijsem.0.005056. PMID 34694987. S2CID 239887308.
- ^ Cho J, Vergin K, Morris R, Giovannoni S (2004). "Lentisphaera araneosa gen. nov., sp. nov, a transparent exopolymer producing marine bacterium, and the description of a novel bacterial phylum, Lentisphaerae". Environ Microbiol. 6 (6): 611–21. doi:10.1111/j.1462-2920.2004.00614.x. PMID 15142250.
- ^ Limam RD, Bouchez T, Chouari R, et al. (October 2010). "Detection of WWE2-related Lentisphaerae by 16S rRNA gene sequencing and fluorescence in situ hybridization in landfill leachate". Can. J. Microbiol. 56 (10): 846–52. doi:10.1139/w10-065. PMID 20962908. Archived from the original on 2012-12-16. Retrieved 2010-11-04.
- ^ a b Choi, Ahyoung; Yang, Seung-Jo; Rhee, Kwang-Hyun; Cho, Jang-CheonYR 2013 (2013). "Lentisphaera marina sp. nov., and emended description of the genus Lentisphaera". International Journal of Systematic and Evolutionary Microbiology. 63 (Pt_4): 1540–1544. doi:10.1099/ijs.0.046433-0. ISSN 1466-5034. PMID 22888188.
{{cite journal}}: CS1 maint: numeric names: authors list (link) - ^ "16S rRNA-based LTP release 123 (full tree)" (PDF). Silva Comprehensive Ribosomal RNA Database. Retrieved 2016-03-20.
- ^ J.P. Euzéby. "Lentisphaerae". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2016-03-20.
- ^ Sayers; et al. "Lentisphaerae". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2016-03-20.
Further reading
[edit]- Limam, Rim Driss; Bouchez, Theodore; Chouari, Rakia; Li, Tianlun; Barkallah, Insaf; Landoulsi, Ahmed; Sghir, Abdelghani (Oct 2010). "Detection of WWE2-related Lentisphaerae by 16S rRNA gene sequencing and fluorescence in situ hybridization in landfill leachate". Canadian Journal of Microbiology. 56 (10): 846–852. doi:10.1139/W10-065. PMID 20962908.