Adlercreutzia
From Wikipedia the free encyclopedia
| Adlercreutzia | |
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| Genus: | Adlercreutzia |
| Type species | |
| Adlercreutzia equolifaciens Maruo et al. 2008 | |
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Adlercreutzia is a genus in the phylum Actinomycetota (Bacteria).[1]
Etymology
[edit]The generic name derives from H. Adlercreutz, a professor at the University of Helsinki in Finland, for his contributions to research on the effects of phytoestrogens on human health.[2]
Taxonomy
[edit]In 2018, Nouioui et al. proposed merging the genera Asaccharobacter, Enterorhabdus and Parvibacter within the genus Adlercreutzia based on observed clustering of these genera within phylogenetic trees.[3] However, subsequent phylogenetic analyses observed that Parvibacter caecicola exhibited much deeper branching compared to other Adlercreutzia species.[4] Additionally, five conserved signature indels (CSIs) present in the proteins excinuclease ABC subunit UvrA, flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase, phosphoribosylformylglycinamidine synthase, valine-tRNA ligase and cysteine–tRNA ligase were identified to be exclusively shared by all Adlercreutzia species with the exception of P. caecicola.[4] Thus, the emended description of the genus Adlercreutzia is the same as given before, with the exclusion of P. caecicola, which has been transferred back into the genus Parvibacter.
Phylogeny
[edit]The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI).[5]
| 16S rRNA based LTP_08_2023[6][7][8] | 120 marker proteins based GTDB 08-RS214[9][10][11] | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Species incertae sedis:[2]
- Adlercreutzia rubneri Stoll et al. 2021
See also
[edit]References
[edit]- ^ a b Maruo, T.; Sakamoto, M.; Ito, C.; Toda, T.; Benno, Y. (2008). "Adlercreutzia equolifaciens gen. Nov., sp. Nov., an equol-producing bacterium isolated from human faeces, and emended description of the genus Eggerthella". International Journal of Systematic and Evolutionary Microbiology. 58 (5): 1221–1227. doi:10.1099/ijs.0.65404-0. PMID 18450717.
- ^ a b c d Euzéby JP, Parte AC. "Adlercreutzia". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved June 23, 2021.
- ^ Nouioui, Imen; Carro, Lorena; García-López, Marina; Meier-Kolthoff, Jan P.; Woyke, Tanja; Kyrpides, Nikos C.; Pukall, Rüdiger; Klenk, Hans-Peter; Goodfellow, Michael; Göker, Markus (2018). "Genome-Based Taxonomic Classification of the Phylum Actinobacteria". Frontiers in Microbiology. 9: 2007. doi:10.3389/fmicb.2018.02007. ISSN 1664-302X. PMC 6113628. PMID 30186281.
- ^ a b Gupta, Radhey S. (2021), Carro, Lorena (ed.), "Eggerthellaceae", Bergey's Manual of Systematics of Archaea and Bacteria, American Cancer Society, pp. 1–11, doi:10.1002/9781118960608.fbm00384, ISBN 978-1-118-96060-8, S2CID 243126790, retrieved 2021-07-05
- ^ Sayers; et al. "Adlercreutzia". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2021-03-20.
- ^ "The LTP". Retrieved 20 November 2023.
- ^ "LTP_all tree in newick format". Retrieved 20 November 2023.
- ^ "LTP_08_2023 Release Notes" (PDF). Retrieved 20 November 2023.
- ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "bac120_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
- ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.
