LAMP1

LAMP1
Identifiers
Aliases	LAMP1, CD107a, LAMPA, LGP120, lysosomal associated membrane protein 1
External IDs	OMIM: 153330; MGI: 96745; HomoloGene: 4061; GeneCards: LAMP1; OMA:LAMP1 - orthologs
Gene location (Human) Chr. Chromosome 13 (human)[1] Band 13q34 Start 113,297,239 bp[1] End 113,323,672 bp[1]
Gene location (Mouse) Chr. Chromosome 8 (mouse)[2] Band 8 A1.1|8 5.73 cM Start 13,209,161 bp[2] End 13,225,338 bp[2]
RNA expression pattern Bgee Human Mouse (ortholog) Top expressed in endothelial cell visceral pleura parotid gland inferior olivary nucleus dorsal motor nucleus of vagus nerve glomerulus kidney tubule metanephric glomerulus gingival epithelium pancreatic ductal cell Top expressed in stroma of bone marrow vestibular membrane of cochlear duct calvaria right kidney lactiferous gland spermatocyte sciatic nerve mesenteric lymph nodes molar carotid body More reference expression data BioGPS More reference expression data
Gene ontology Molecular function protein domain specific binding virus receptor activity protein binding enzyme binding Cellular component integral component of membrane multivesicular body phagolysosome membrane vesicle endosome late endosome membrane synaptic vesicle cytolytic granule melanosome integral component of plasma membrane alveolar lamellar body cell surface lysosomal membrane soma vacuole dendrite phagocytic vesicle perinuclear region of cytoplasm sarcolemma lysosome endosome membrane extracellular exosome cytoplasmic vesicle external side of plasma membrane cytosol cytoplasm plasma membrane azurophil granule membrane autolysosome ficolin-1-rich granule membrane integral component of synaptic vesicle membrane late endosome membrane Biological process protein stabilization Golgi to lysosome transport positive regulation of natural killer cell degranulation regulation of organelle transport along microtubule viral entry into host cell viral process establishment of protein localization to organelle positive regulation of natural killer cell mediated cytotoxicity granzyme-mediated apoptotic signaling pathway autophagic cell death neutrophil degranulation Sources:Amigo / QuickGO
Orthologs Species Human Mouse Entrez 3916 16783 Ensembl ENSG00000185896 ENSMUSG00000031447 UniProt P11279 P11438 RefSeq (mRNA) NM_005561 NM_010684 NM_001317353 RefSeq (protein) NP_005552 NP_001304282 NP_034814 Location (UCSC) Chr 13: 113.3 – 113.32 Mb Chr 8: 13.21 – 13.23 Mb PubMed search [3] [4]
Wikidata
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Lysosomal-associated membrane protein 1 (LAMP-1) also known as lysosome-associated membrane glycoprotein 1 and CD107a (Cluster of Differentiation 107a), is a protein that in humans is encoded by the LAMP1 gene. The human LAMP1 gene is located on the long arm (q) of chromosome 13 at region 3, band 4 (13q34).

Lysosomal-associated membrane protein 1 is a glycoprotein from a family of Lysosome-associated membrane glycoproteins.^[5] The LAMP-1 glycoprotein is a type I transmembrane protein^[6] which is expressed at high or medium levels in at least 76 different normal tissue cell types.^[7] It resides primarily across lysosomal membranes,^[8] and functions to provide selectins with carbohydrate ligands.^[5] CD107a has also been shown to be a marker of degranulation on lymphocytes such as CD8+ and NK cells,^[9] and may also play a role in tumor cell differentiation and metastasis.

Residing primarily across lysosomal membranes, these glycoproteins consist of a large, highly glycosylated end with N-linked carbon chains on the luminal side of the membrane, and a short C-terminal tail^[6] exposed to the cytoplasm.^[8] The extracytoplasmic region contains a hinge-like structure which can form disulphide bridges homologous to those observed in human immunoglobulin A.^[8] Other characteristics of the structure of the LAMP-1 glycoproteins include:

• A polypeptide core of ~40kDa^[8]
• 18 {N-glycosylation} sites to help with the addition of sugar chains^[10]
• Polylactosamine attachments which protect the glyocoprotein from degradation by lysosomal proteases^[10]
• Significant quantities of polylactosaminoglycan and sialic acid to traverse the trans-Golgi cisternae.^[10]
• poly-N-acetyllactosamine groups which are involved in interactions with selectin and other glycan-binding proteins^[11]

LAMP1 and LAMP2 glycoproteins comprise 50% of all lysosomal membrane proteins,^[6] and are thought to be responsible in part for maintaining lysosomal integrity, pH and catabolism.^[6][11] The expression of LAMP1 and LAMP2 glycoproteins are linked, as deficiencies in LAMP1 gene will lead to increased expression of LAMP2 glycoproteins.^[11] The two are therefore thought to share similar functions in vivo.^[6] However, this makes the determining the precise function of LAMP1 difficult, because while the LAMP1 deficient phenotype is little different than the wild type due to LAMP2 up regulation,^[6][11] the LAMP1/LAMP2 double deficient phenotype leads to embryonic lethality.^[11]

Although the LAMP1 glycoproteins primarily reside across lysosomal membranes, in certain cases they can be expressed across the plasma membrane of the cell.^[11] Expression of LAMP1 at the cell surface can occur due to lysosomal fusion with the cell membrane.^[12] Cell surface expression of LAMP1 can serve as a ligand for selectins^[13][14] and help mediate cell-cell adhesion.^[15] Accordingly, cell surface expression of LAMP1 is seen in cells with migratory or invasive functions, such as cytotoxic T cells, platelets and macrophages.^[16] Cell surface expression of LAMP1 and LAMP2 is also often seen in cancer cells,^[16][17] particularly cancers with high metastatic potential, such as colon carcinoma and melanoma,^[16] and has been shown to correlate with their metastatic potential.^[11]

LAMP1 expression on the surface of tumor cells has been observed for a number of different cancer types, particularly in highly metastatic cancers such as pancreatic cancer,^[18][19] colon cancer^[16][17] and melanoma.^[16][17] The structure of LAMP1 correlates with differentiation^[8][20] and metastatic potential^[11] of tumor cells as it is thought to help mediate cell-cell adhesion ^[17] and migration.^[15][18] Indeed, the adhesion of some cancer cells to the extracellular matrix is mediated by interactions between LAMP1 and LAMP2 and E-selectin and galectins, with the LAMPs serving as ligands for the cell-adhesion molecules.^[17]

Cell membrane expression of LAMP-1 observed in the following cancer types:

• Human fibrosarcoma,^[17]
• Colon adenocarcinoma,^[17]
• Melanoma,^[17]
• Pancreatic adenocarcinoma,^[19] and
• Astrocytoma.^[18]

• Cluster of differentiation

• LAMP1+protein,+human at the U.S. National Library of Medicine Medical Subject Headings (MeSH)
• PDBe-KB provides an overview of all the structure information available in the PDB for Human Lysosome-associated membrane glycoprotein 1

This article incorporates text from the United States National Library of Medicine, which is in the public domain.